Students’ Publications
(Names of MBBE Graduate students are shown in bold)
2008 | 2007 | 2006 | 2005 | 2004
2008
Ackerman, C.M., Qingyi Yu, S. Kim, R.E. Paull, P.H. Moore, R. Ming. 2008. B-class MADS-box genes in trioecious papaya: Two TM6 paralogs, CpTM6-1 and CpTM6-2, and a PI ortholog CpPI. Planta 227:741-753.
Andeme-Ondzighi, C., Christopher, D.A. Cho, E.J., Chang, S-C., Staehelin, L.A. 2008. Arabidopsis Protein Disulfide Isomerase-5 Inhibits and Accompanies Cysteine Proteases During Trafficking to Vacuoles Prior to Programmed Cell Death of the Endothelium in Developing Seeds. The Plant Cell (in press).
Awaya JD, Tittabutr P, Li QX, Borthakur D (2008) Pyruvate carboxylase is involved in metabolism of mimosine by Rhizobium sp. strain TAL1145. Archives of Microbiology (in press).
Breves J.P., Veillette P.A., Specker, J.L. (2008) Ghrelin in the summer flounder: Immunolocalization to the gastric glands and action on plasma cortisol levels. Comparative Biochemistry and Physiology, Part A (in press).
Chapagain M.L., L. Sumibcay, U. Gurjav, P.H. Kaufusi, R.E. Kast, and V.R. Nerurkar. 2008. Serotonin receptor 2A blocker (Risperidone) has no effect on human polyomavirus JC infection of primary human fetal glial cells. Journal of Neurovirology (in press).
Eustice, M., Qingyi Yu, C.W. Lai, S. Hou, J. Thimmapuram, L. Liu, M. Alam, P.H. Moore, G.G. Presting, R. Ming. 2008. Development and application of microsatellite markers for genomic analysis of papaya. Tree Genetics and Genomics 4:333-341.
Hennessee, C. T., Seo, J. S., Alvarez A. M., Li, Q. X. Isolation and characterization of five new polycyclic aromatic hydrocarbon (PAH)-degrading Mycobacterium species isolated from Hawaiian soils: Mycobacterium crocinum sp. nov., Mycobacterium pallens sp. nov., Mycobacterium rutilum sp. nov., Mycobacterium rufum sp. nov., and Mycobacterium aromaticivorans sp. nov. International Journal of Systematic and Evolutionary Microbiology (in press)
Hennessee, C. T., Li, Q. X. Micrococcineae: Arthrobacter and Relatives. Book Chapter in Handbook of Hydrocarbon Microbiology. Ed.,Ken Timmis. Springer Verlag, 2008.
Jube S, Awaya J, Borthakur D (2008) Expression of Rhizobium pydA-pydB fusion gene in Nicotiana tabacum confers resistance to the toxic aromatic compound 3-hydroxy-4-pyridone. Biologia Plantarum (in press).
Koomoa DL, Go RC, Wester K, Bachmann AS. Expression profile of PRAF2 in the human brain and enrichment in synaptic vesicles. Neurosci Lett. 2008 May 9;436(2):171-6. Epub 2008 Mar 15.
Kubota, R., D. M. Jenkins, B. Vine, & A. Alvarez. 2008. Detection of Ralstonia solanacearum by Loop-mediated isothermal AMPlification method (LAMP). Phytopathology (In Press).
Kutin RK, Jenkins DM, Borthakur D (2008) Characterization of a Corynebacterium strain that can reduce nitrate from high strength nitrate medium. Bioremediation J (in press)
Lu, D.-P., Christopher, D.A. 2008. Endoplasmic reticulum stress activates the expression of a sub-group of protein disulfide isomerase genes and AtbZIP60 modulates the response in Arabidopsis thaliana. Molecular Genetics and Genomics (in press).
Lu, D.-P., Christopher, D.A. 2008. The effect of irradiance and redox-modifying reagents on the 52 kDa protein disulfide isomerase of Arabidopsis chloroplasts. Biologia Plantarum 52: 42-48.
Lu, D.-P., Christopher, D.A. 2008. Light enhances the unfolded protein response as measured by BiP2 gene expression and the secretory GFP-2SC marker in Arabidopsis. Physiologia Plantarum (in press).
Ming, R.*, S. Hou*, Y. Feng*, Qingyi Yu*, A. Dionne-Laporte, J. H. Saw, P. Senin, W. Wang, B. V. Ly, K. L. T. Lewis, S. L. Salzberg, L. Feng, M. R. Jones, R. L. Skelton, J. E. Murray, C. Chen, W. Qian, J. Shen, P. Du, M. Eustice, E. Tong, H. Tang, E. Lyons, R. E. Paull, T. P. Michael, K. Wall, D. Rice, H. Albert, M.-L. Wang, Y. J. Zhu, M. Schatz, N. Nagarajan, R. Acob, P. Guan, A. Blas, C. M. Wai, C. M. Ackerman, Y. Ren, C. Liu, J. Wang, J. Wang, J.-K. Na, E. V. Shakirov, B. Haas, J. Thimmapuram, D. Nelson, X. Wang, J. E. Bowers, A. R. Gschwend, A. L. Delcher, R. Singh, J. Y. Suzuki, S. Tripathi, K. Neupane, H. Wei, B. Irikura, M. Paidi, N. Jiang, W. Zhang, G. Presting, A. Windsor, R. Navajas-Pérez, M. J. Torres, F. A. Feltus, B. Porter, Y. Li, A. M. Burroughs, M.-C. Luo, L. Liu, D. A. Christopher, S. M. Mount, P. H. Moore, T. Sugimura, J. Jiang, M. A. Schuler, V. Friedman, T. Mitchell-Olds, D. E. Shippen, C. W. dePamphilis, J. D. Palmer, M. Freeling, A. H. Paterson, D. Gonsalves, L. Wang, M. Alam. 2008. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature452:991-996. (*Equal contribution) (Cover article).
Ming, R., Qingyi Yu, A. Blas, C. Chen, J.-K. Na, P.H. Moore. 2008. Genomics of papaya, a common source of vitamins in the tropics. (In: Genomics of Tropical Crop Plants, P.H. Moore and R. Ming, eds.), Springer. pp 405-420.
Moss, D.R., S.M. Arce, C.A. Otoshi, and S.M. Moss. Inbreeding effects on hatchery and growout performance of Pacific white shrimp, Penaeus (Litopenaeus) vannamei. Journal of the World Aquaculture Society. (in press)
Riley, L.G., Fox, B.K., Breves, J.P., Kaiya, H., Dorough, C.P., Hirano, T., Grau, E.G. (2008) Absence of effects of short-term fasting on plasma ghrelin and brain expression of ghrelin receptors in the tilapia, Oreochromis mossambicus. Zoological Science (in press)
Sharma A, Presting GG. 2008. Centromeric retrotransposon lineages predate the maize/rice divergence and differ in abundance and activity. Mol Genet Genomics. Feb;279(2):133-47. Epub 2007 Nov 14.
Sharma A, Schneider K, Presting G. (2008). Sustained Retrotransposition is Mediated by Nucleotide Deletions and Inter-element Recombinations. Proc Natl Acad Sci, USA (in press).
Theriault AG, Kuh JE, Maiyoh GK, Yoshimura H. 2008. Amelioration of the metabolic syndrome by the vitamin E analog, tocotrienol. J Clin Biochem Nutr; (in press).
Tittabutr P, Awaya JD, Li QX, Borthakur D (2008) The cloned 1-aminocyclopropane-1-carboxylate (ACC) deaminase gene from Sinorhizobium sp. strain BL3 in Rhizobium sp. strain TAL1145 promotes nodulation and growth of Leucaena leucocephala. Systematic and Applied Microbiology 31:141-150.
Uchida, K., Moriyama, S., Breves, J.P., Fox, B.K., Pierce, A.L., Borski, R.J., Hirano, T., Grau, E.G. (2008) cDNA cloning and isolation of somatolactin in Mozambique tilapia and effects of seawater acclimation, confinement stress, and fasting on its pituitary expression. General and Comparative Endocrinology (in press).
Walton CB, Inos ABH, Andres OA, Jube S, de Couet HG, Douglas JT, Patek PQ, Borthakur D (2008) Immunization with hybrid recombinant Mycobacterium tuberculosis H37Rv proteins increases the TH1 cytokine response in mice following a pulmonary instillation of irradiated mycobacteria. Vaccine 26:4396-4402.
doi:10.1016/j.vaccine.2008.05.093
Yu, Qingyi, D. Steiger, E. Kramer, P.H. Moore, R. Ming. 2008. Floral MADS-Box genes in trioecious papaya: Characterization of AG and AP1 subfamily genes revealed a sex-type-specific gene. Topical Plant Biology doi:10.1007/s12042-007-9000
Yu, Qingyi, R. Navajas-Pérez, E. Tong, J. Robertson, P.H. Moore, A.H. Paterson, R. Ming. 2008. Recent origin of dioecious and gynodioecious Y chromosomes in papaya. Tropical Plant Biology 1:49-57.
Yu, Qingyi, S. Hou, F.A. Feltus, M. R. Jones, J. Murray, O. Veatch, C. Lemke, J.H. Saw, R.C. Moore, J. Thimmapuram, L. Liu, P.H. Moore, M. Alam, J. Jiang, A. H. Paterson, R. Ming. 2008. Low X/Y divergence in four pairs of papaya sex-liked genes. Plant J. 53:124-132 (Cover story).
Zhang W., X. Wang, Qingyi Yu, R. Ming, and J. Jiang. 2008. DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya. Genome Research DOI: 10.1101/gr.078808.108
2007
Awaya JD, Walton C, Borthakur D (2007) The pydA-pydB gene produces an active dioxygenase-hydrolase that degrades 3-hydroxy-4-pyridone, an intermediate of mimosine metabolism. Appl. Microbiol. Biotechnol 75(3):583-588.
Campbell S, Harada RM, Li QX (2007) Chryseobacterium pufferi sp. nov., isolated from the kidneys of a pufferfish. Int J Syst Evol Microbiol 58: 290-293.
Campbell S, Harada RM, Li QX (2007) Ferrimonas sinisina sp. nov., a novel gammaproteobacterium isolated from the mucus of a puffer fish caught in Kaneohe Bay, Hawai’i. Int J Syst Evol Microbiol 57: 2670-2673.
Chen, C., Qingyi Yu, S. Hou, Y. Li, M. Eustice, R. L. Skelton, O. Veatch, R. Herdes, L. Diebold, J. Saw, Y. Feng, L. Bynum, L. Wang, P. H. Moore, R. E. Paull, M. Alam, R. Ming. 2007. Construction of a sequence-tagged high density genetic map of papaya for comparative structural and evolutionary genomics in Brassicales. Genetics 177:2481-2491.
Cheng, J.Z.; Harada, R.; Campbell, S.; Li, Q.X. 2007. Biodegradation of dinitrotoluene by Pseudoxanthomonas sp. JA40. J. Young Investigators. 16(3): Feb 2007, http://www.jyi.org/research/re.php?id=940
Christopher DA, Borsics T, Yuen CYL, Ullmer W, Andème-Ondzighi C, Andres ML, Kang BH, Staehelin LA (2007) The cyclic nucleotide-gated cation channel AtCNGC10 traffics from the ER via Golgi vesicles to the plasma membrane of Arabidopsis root and leaf cells. Biomed. Cent. Plant Biol. 7(48): 1471-2229.
Co JKG, Verma S, Gurjav U, Sumibcay L, Nerurkar VR (2007) Interferon-a and -ß restrict polyomavirus JC replication in primary human fetal glial cells: implications for progressive multifocal leukoencephalopathy therapy. J Infect Dis 196: 712-718.
Fox B. K., Tadaomi Naka, Koji Inoue, Yoshio Takei, Tetsuya Hirano and E. Gordon Grau (2007) In vitro effects of homologous natriuretic peptides on growth hormone and prolactin release in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 150: 270-277.
Fox, B. K., Naka, T., Inoue, K., Takei, Y., Hirano, T., and Grau, E. G., 2007. In vitro effects of homologous natriuretic peptides on growth hormone and prolactin release in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 150, 270-277.
Fox, B. K., Riley, L. G., Dorough, C., Kaiya, H. T., Hirano, T., and Grau, E. G., 2007. Effects of homologous ghrelins on the growth hormone/insulin-like growth gactor-I axis in the tilapia, Oreochromis mossambicus. Zoological Science, 24:391-400.
Geerts D, Wallick CJ, Koomoa DL, Koster J, Versteeg R, Go RC, Bachmann AS (2007) Expression of prenylated Rab acceptor 1 domain family, member 2 (PRAF2) in neuroblastoma: correlation with clinical features, cellular localization, and cerulenin-mediated apoptosis regulation. Clin Cancer Res. 2007 Nov 1;13(21):6312-9.
Jube S, Borthakur D (2007) Expression of bacterial genes in transgenic tobacco: methods, applications and future prospects. Electronic J Biotechnol. 10 (3)452-467.
Kim, H.-J.; Gee, S.J.; Li, Q.X.; Hammock, B.D. 2007. Non-competitive fluorescent immunoassay for detection of pyrethroid biomarker 3-phenoxybenzoic acid in human urine with KinExATM 3000. In: Rational Environmental Management of Agrochemicals – Risk Assessement, Monitoring, and Remedial Action. Ivan R. Kennedy, Keith R. Solomon, Shirley J. Gee, Angus N. Crossan, Shuo Wang, Francisco Sanchez-Bayo (Editors). ACS Symposium Series 966. Washington DC.
Lee S-E, Seo J-S, Keum YS, Lee K-J, Li QX (2007) Fluoranthene metabolism and associated proteins in Mycobacterium sp. JS14. Proteomics 7(12): 2059-2069.
Lim S, Dragull K, Tang CS, Bittenbender S and Nerurkar PV (2007). Effects of kava alkaloid, pipermethystine (PM), and kavalactones on oxidative stress and hepatic cytochrome P450 in F344 Rats. Toxicological Sciences 97(1): 214-21.
Maiyoh GK, Kuh JE, Casaschi A, Theriault AG (2007) Cruciferous indole-3-carbinol inhibits apolipoprotein B secretion in HepG2 cell. J Nutrition 137: 2185-2189.
Ming, R., Q. Yu, P.H. Moore. 2007. Sex determination in papaya. Seminars in Cell and Developmental Biology 18:401-408.
Moss, D.R., S.A. Arce, C.A. Otoshi, R.W. Doyle, and S.M. Moss. 2007. Effects of inbreeding on survival and growth of Pacific white shrimp Litopenaeus vannamei. Aquaculture, 27S1:S30-S37.
Pierce, A.L., Fox, B.K., Davis, L.K., Visitacion, N., Kitahashi,T., Hirano, T., and Grau, E.G. 2007. Prolactin receptor, growth hormone receptor, and putative somatolactin receptor in Mozambique tilapia: Tissue specific expression and differential regulation by salinity and fasting. General and Comparative Endocrinology 154, 31-40.
Seo JS, Keum Y-S, Harada RM, Li QX (2007) Isolation and characterization of bacteria capable of degrading polycyclic aromatic hydrocarbons (PAHs) and organophosphorus pesticides from PAHs-contaminated soil in Hilo, Hawaii. J. Agric. Food Chem. 55(14):5383-5389.
Seo J-S, Keum YS., Hu Y, Lee SE, Li QX (2007) Degradation of phenanthrene by Burkholderia sp. C3: initial 1,2- and 3,4-dioxygenation and meta- and ortho-cleavage of naphthalene-1,2-diol. Biodegradation 18:123-131.
Vaidyanathan H, J. Opoku-Ansah, S. Pastorino, H. Renganathan, M.L. Matter and J.W. (2007) Ramos. ERK MAP kinase is targeted to RSK2 by the phosphoprotein PEA-15. PNAS, 105(50):19837-19842.
Xu Z and Yu J (2008). Hydrodynamics and mass transfer in a novel multiple airlifting membrane bioreactor. Chemical Engineering Science 63:1941-1949.
Yu, Q., S. Hou, R. Hobza, F.A. Feltus, X. Wang, W. Jin, R.L. Skelton, A. Blas, C. Lemke, J. H. Saw, P. H. Moore, M. Alam, J. Jiang, A. H. Paterson, B. Vyskot, R. Ming. 2007. Chromosomal location and gene paucity of the male specific region on papaya Y chromosome. Mol. Genet. Genomics 278:177-185.
2006
Andres, M.A., F.P., Bellinger, W.Y. Chan, I. Cook, L.K. Davis, B. K. Fox, E.G. Grau, and T. Hirano (2006) Ionotropic glutamate receptor activation increases intracellular calcium in prolactin-releasing cells of the adenohypophysis. American Journal of Physiology-Endocrinology and Metabolism (in press).
Bellinger,F.P., B.K. Fox, W.Y. Chan, L.K. Davis, Andres, M.A., T. Hirano , E.G. Grau, and I. Cook (2006) Ionotropic Glutamate Receptor Activation Increases Intracellular Calcium In Prolactin-Releasing Cells Of The Adenohypophysis. American Journal of Physiology-Endocrinology and Metabolism 291(6):E1188-96.
Cheng, J.Z.; Harada, R.; Campbell, S.; Li, Q.X. (2006) Biodegradation of dinitrotoluene by Pseudoxanthomonas sp. JA40. J. Young Investigators. (in press).
Denery, R.J.; Cooney, J.M.; Li, Q.X. (2006) Metabolic profiling to reflect gene expression in Streptomyces tenjimariensis. Industrial Biotechnology. 2(1):51-54.
Doyle, R.W., D.R. Moss, and S.M. Moss. 2006. Shrimp copyright: inbreeding strategies effective against illegal copying of genetically improved shrimp. Global Aquaculture Advocate, 9(2): 76-79.
Dragull K, Lin GD, Tang CS (2006). Chemistry, pharmacology and Safety aspects of Kava. In: "Hawaiian 'Awa: Views of an Ethnobotanical Treasure" Johnston E and Rogers H, eds, pp. 19-29. Assoc. for Hawaiian 'Awa Publication, Hilo, HI.
Fox B. K., L. G. Riley, H. Kaiya, T. Hirano and E. G. Grau (2006) Effects of homologous ghrelins on the growth hormone/insulin-like growth factor-I axis in the tilapia, Oreochromis mossambicus. Zoological Science (in press).
Fox B. K., L. G. Riley, T. Hirano and E. G. Grau (2006) Effects of fasting on growth hormone, growth hormone receptor and insulin-like growth factor-I axis in seawater-acclimated tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 148(3):340-7.
Fox B. K., Tadaomi Naka, Koji Inoue, Yoshio Takei, Tetsuya Hirano and E. Gordon Grau (2006) In vitro effects of homologous natriuretic peptides on growth hormone and prolactin release in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology (in press).
Harada, R.M.; Campbell, S.; Li, Q.X. (2006) Pseudoxanthomonas kalamensis sp. nov., a novel gammaproteobacterium isolated from Johnston Atoll, North Pacific Ocean. Int J Syst Evol Microbiol. 56:1103-1107.
Jhoo JW, Freeman JP, Heinze TM, Moody JD, Schnackenberg LK, Beger RD, Dragull K, Tang CS, Ang CY (2006). In vitro cytotoxicity of nonpolar constituents from different parts of kava plant (Piper methysticum). J Agric Food Chem 54(8):3157-3162.
Jube S, and Borthakur D (2006) Recent advances in food biotechnology research. In: Hui YH, Nip W-K, Nollet LML, Paliyath G, Sahlstrøm S, and Simpson BK (eds) Food Biochemistry and Food Processing. pp 35-70, Blackwell Publishing, Oxford, U.K.
Kim, H.-J.; Shelver, W.L.; Hwang, E.-C.; Xu, T.; Li, Q.X. (2006) Automated flow fluorescent immunoassay for part per trillion detection of the neonicotinoid insecticide thiamethoxam. Analytica Chimica Acta 571 (1):66-73.
Kubota R, Jenkin D M, Vine B, Alvarez A (2006) Loop mediated isothermal application of a flagelar gene for discriminating different biovars of Ralstonia solanacearum (in preparation for Phytopathology)
Lai, Chun Wan J., Yu, Qingyi, Hou, Shaobin, Skelton, Rachel L., Jones, Meghan R., Lewis, Kanako L. T., Murray, Jan, Eustice, Moriah, Guan, Peizhu, Agbayani, Ricelle, Moore, Paul H., Ming, Ray, and Presting, Gernot G. (2006) Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome. Mol Genetics Genomics 276:1-12.
Leary JK, Hue NV, Singleton PW, D. Borthakur (2006) Soil acidification, nutrient depletion, and symbiotic nitrogen fixation are the major features of gorse (Ulex europaeus) infestation on volcanic soils in Hawaii. Biol. Fertility Soils 42: 215-223. Published online: 28 June 2005
Leary JK, Singleton PW, Scowcroft PG, Borthakkur D (2006) Symbiotic diversity in the cosmopolitan genus Acacia. Symbiosis 41 (3): 107-117
Li RW, Douglas TD, Maiyoh GK, Adeli K, Theriault AG (2006) Green tea leaf extract improves lipid and glucose homeostasis in a fructose-fed insulin resistant hamster model. J Ethnopharm 104: 24-31.
Lu D-P, and D.A. Christopher, Immunolocalization of a protein disulfide isomerase to Arabidopsis thaliana chloroplasts and its association with starch biogenesis. International Journal of Plant Sciences 167 (1): 1-9 (2006).
Luce A, Sharma A, Mollere O, Nagaki K, Jiang J, Presting G, Dawe RK. (2006) Precise centromere mapping using a combination of repeat junction markers and ChIP-PCR. Genetics (in press).
Ming, R., Yu, Q. , and Moore, P.H. (2006) Review: sex determination in papaya. Seminars Cell Devel. Biol. (in press).
Moss D.R. and S.M. Moss. (2006) Effects of gender and size on feed acquisition in the Pacific white shrimp Litopenaeus vannamei. Journal of the World Aquaculture Society, 37(2):161-167.
Muranyi M, Ding C, He Q, Lin Y, Li PA (2006) Streptozotocin-induced diabetes causes astrocyte death after ischemia and reperfusion injury. Diabetes. 55: 349-355
Nerurkar PV, Lee YK, Linden EH, Lim S, Pearson L, Frank J and Nerurkar VR (2006) Lipid lowering effects of Momordica charantia (bitter melon) on cellular lipids and apolipoproteins in protease inhibitor-treated human hepatoma cells. British J Pharmacology, 2006; 148:1156-1164.
Peckham, G. D., Bugos, R.C., Su, W.W. (2006) Purification of GFP fusion proteins from transgenic plant cell cultures. Protein Expr. Purif. 49: 183-189.
Seo, J.S., Keum, Y.S., Cho, I.K., Li, Q.X. (2006) Degradation of dibenzothiophene and carbazole by Arthrobacter sp. P1-1. Int. Biodeterioration & Biodeg. 58:36-43.
Seo, J.S., Keum, Y.S., Hu, Y., Lee, S.E., Li, Q.X. (2006) Degradation of phenanthrene by Burkholderia sp. C3: initial 1,2- and 3,4-dioxygenation and meta- and ortho-cleavage of naphthalene-1,2-diol. Biodegradation. (in press). DOI 10.1007/s10532-006-9048-8.
Seo, J.S., Keum, Y.S., Hu, Y., Lee, S.E., Li, Q.X. (2006) Phenanthrene degradation in Arthrobacter sp. P1-1: Initial 1,2-, 3,4- and 9,10-dioxygenation, and meta- and ortho-cleavages of naphthalene-1,2-diol after its formation from naphthalene-1,2-dicarboxylic acid and hydroxyl naphthoic acids. Chemosphere (in press). DOI: 10.1016/j.chemosphere.2006.04.067.
Skelton, R. L., Yu, Q, Srinivasan, R., Manshardt, R., Moore, P. H., and Ming, R. Tissue differential expression of Lycopene ß-cyclase gene in papaya. Cell Research 731-739. 2006.
Verma S, Ziegler K, Ananthula P, Co JK-G, Frisque RJ, Yanagihara R, Nerurkar VR (2006) JC virus induces altered patterns of cellular gene expression: Interferon-inducible genes as major transcriptional targets. Virology 345:457-467.
Zhu, Y. J, Agbayani, R, Tang, CS, Moore, PH (2006) Developing transgenic papaya to improve broad disease resistance. Horticulturea Acta (in press).
2005
Ako H, Shimizu E, de Lemos K, Asano L, and Tamaru C (2005) Behavior limitations of high density fish growout. World Aquaculture 36:25-29, 67
Awaya JD, Fox PM, Borthakur D (2005) pyd genes of Rhizobium sp. strain TAL1145 are required for degradation of 3-hydroxy-4-pyridone, an aromatic intermediate in mimosine metabolism. J. Bacteriol. 187 (13): 4480-4487.
Casaschi A, Maiyoh GK, Khosrow A, Theriault AG (2005) Increased Diacylglycerol Acyltransferase (DGAT) Activity is Associated with Triglyceride Accumulation in Tissues of Diet-induced Insulin Resistant Hyperlipidemic Hamsters. Metabolism 2005; 54: 403-409.
Delanoy, G.; Li, Q.X.; Yu, J. (2005) Activity and stability of laccase in conjugation with chitosan. Int’l J. of Biological Macromolecules. 35(1-2): 89-95.
Hong, S.-M.; Atkinson, S.; Hülck, K. ; Li, Q.X. (2005) PCB concentrations and profiles in tissues of Stellar sea lions from Alaska and the Bering Sea. Eds.: Thomas R. Loughlin, Shannon Atkinson and Donald G. Calkins. Synopsis of Research on Steller Sea Lions: 2001-2005. Alaska SeaLife Center. p110-120.
Keum, Y.-S.; Seo, J.-S.; Li, Q.X. (2005) Synthesis of bacterial metabolites of polycyclic aromatic hydrocarbons: benzochromenones, o-carboxyvinylnaphthoates, and o-substituted aryl-?-oxobutenoates. Synthetic Communications. 35:2685-2693.
Li X. L. , T. Borsics, H.M. Harrington, D.A. Christopher (2005) Arabidopsis AtCNGC10 rescues potassium channel mutants of E. coli, yeast and Arabidopsis and is regulated by calcium/calmodulin and cyclic GMP in E. coli. Functional Plant Biology 32:643-653.
Lu D-P, and D.A. Christopher (2005) Analysis of isoforms of protein disulfide isomerase in plants by immuno-microscopy. Microscopy & Microanalysis, 11 (S2):1160-1161
Riley, L. G., Fox, B. K. , Kaiya, H., Hirano, T., and E.G. Grau (2005) Long-term treatment of ghrelin stimulates feeding, fat deposition, and alters the GH/IGF-I axis in the tilapia, Oreochromis mossambicus. General and Comparative Endocrinology 142: 234-40.
Shelver, W.L.; Kim, H.-J.; Li, Q.X. (2005) Development of monoclonal antibody based ELISA for the ?-adrenergic agonist zilpaterol. J. Agric. Food Chem. 53: 3273-3280.
Shelver, W.L.; Keum, Y.-S.; Kim, H.-J.; Rutherford, Drew; Hakk, Heldur H.; Bergman, Ake; Li, Q.X. (2005) Hapten syntheses and antibody generation for the development of polybrominated flame retardants ELISA. J. Agric. Food Chem. 53 (10): 840-3847.
Stroncek, J.; Denery, J.R. ; Li, Q.X. (2005) Relationship between gene expression and cell metabolism in the marine bacterium Streptomyces tenjimariensis. J. Young Investigators (online) 12 (4): http://www.jyi.org/research/re.php?id=142.
Su, W.W., Liu, B., Lu, W.B., Xu, N.S., Du, G.C., Tan, J.L. (2005) Observer-based online compensation of inner filter effect in monitoring fluorescence of GFP-expressing plant cell cultures. Biotechnol. Bioeng. 91 (2), 213-226.
Wang, D.; Atkinson, S.; Huelck, K.; Li, Q.X. (2005) Polychlorinated biphenyls in eggs of Spectacled Eiders (Somateria fischeri) from the Yukon-Kuskokwim Delta, Alaska. Bulletin Environ. Contam. Toxicol. 75:760-767.
Yu, Qingyi, Moore, P. H., Albert, H. H., Roader, A. H. K., and Ming, R. (2005)Cloning and characterization of a FLORICAULA/LEAFY ortholog, PFL, in polygamous papaya. Cell Res. 15 (8):576-584
Zhu, Y. J., Agbayani, Ricelle, Albert, H., and Moore, P. H. (2005) Effective selection of transgenic papaya plants with the PMI/Man selection system. Plant Cell Rep 24:426-432.
2004
Casaschi A, Maiyoh GK, Rubio B, Li RW, Adeli K, Theriault A (2004) The chalcone, xanthohumol, inhibits triglyceride and apolipoprotein B secretion in HepG2 cells. J Nutr 2004; 134: 1340-1346.
Casaschi A, Rubio B, Maiyoh GK, Theriault A (2004) Inhibitory activity of diacylglycerol acyltransferase (DGAT) and microsomal triglyceride transfer protein (MTP) by the flavonoid, taxifolin, in HepG2 cells: Potential role in the regulation of apolioprotein B secretion. Atherosclerosis 176: 247-253.
Denery J.; Dragull, K.; Tang, C.S.; Li, Q.X. (2004) Pressurized fluid extraction of kavalactones from Piper methysticum root. Anal. Chim. Acta. 501 (2): 175-181.
Denery JR, Dragull K, Tang CS, and QX Li (2004). Pressurized fluid extraction of carotenoids from Haematococcus pluvialis and Dunaliella salina and kavalactones from Piper methysticum. Analytica Chimica 501, 175–181
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Kim, H.-J.; Shelver, W.L.; Li, Q.X. (2004) Monoclonal antibody-based enzyme-linked immunosorbent assay for the insecticide imidacloprid. Anal. Chim. acta. 509 (1): 111-118.
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Liu, Z., Moore, P. H., Ma, Hao, Ackerman, C. M., Ragiba, M., Yu, Qingyi, Pearl, H. M., Kim, M. S., Charlton, J. W., Stiles, J. I., Zee, F. T., Paterson, A. H., and Ming, R. (2004) A primitive Y chromosome in papaya marks incipient sex chromosome evolution. Nature 427: 348-352.
Ma, Hao, Moore, P. H., Liu, Z., Kim, M. S., Yu, Qingyi, Fitch, M. M. M., Sekioka, T., Paterson, A. H. and Ming, R. (2004) High-density linkage mapping revealed suppression of recombination at the sex determination locus in papaya. Genetics 166: 419-436.
Ma, Hongmei, Schulze, S., Lee, S., Mirkov, E., Irvine, J., Moore, P. and Paterson, A. (2004) An EST survey of the sugarcane transcriptome. Theor Appl Genet 108: 851-863.
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Oh, B.-Y.; Li, Q.X.; Kim, J.H. (2004) Monitoring and assessment of pesticide residues in major river, arable soil and agricultural produce in Korea. In: Proceeding of the International Symposium on “Assessing and Rational Management of the Agro-ecosystem for Clean and Friendly Future Environment”; Hee-Myong Ro and Young-Hwan Park (Eds). Research Institute for Agricultural & Life Sciences, Seoul National University, Seoul, Korea. pp: 1-29.
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Qiu, Xiaohui, Guan, Peizhu, Wang, M-L., Moore, P. H., Zhu, Y. J., Hu, J., Borth, W., and Albert, H. H. (2004) Identification and expression analysis of BTH induced genes in papaya. Physiol. Mol. Plant Pathol 65: 21-30.
Schenck, S., Crepeau, M. W., Wu, K. K., Moore, P. H., Yu, Qingyi and Ming, R. (2004) Genetic diversity and relationships in native Hawaiian Saccahrum officinarum sugarcane. J. Heredity 95:327-331.
Su, W.W., Guan, P.Z., Bugos, R. (2004) High level of secretion of functional green fluorescent protein from transgenic tobacco cell cultures: characterization and sensing. Biotechnol. Bioeng. 85(6), 610-9.
Zhu, Y. J., Agbayani, Ricelle, and Moore, P. H. (2004) Green fluorescent protein, as a positive selection marker, improves the efficiency of papaya (Carica papaya L.) transformation while avoiding selection for antibiotic resistance. Plant Cell Rep 22: 660-667.
Zhu, Y. J., Agbayani, Ricelle, Jackson, M.C., Tang, C.S., and Moore, P. H. (2004) Expression of the grapevine stilbene synthase gene VST1 in papaya provides increased resistance against disease caused by Phytophthora palmivora. Planta 220:241-250.
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